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Sequences annotation and single nucleotide polymorphism of the major histocompatibility complex in the domestic Cat. Additionally, we searched for novel ERV sequences in available genome sequences from the domestic cat Felis catus and the Siberian tiger Panthera tigris altaica. Cougar hookup Millers point 2000 nsw However, it is unlikely that the present study exhausted the diversity of ERVs in Neotropical cats, considering the numerous retroviral sequences found during our searches using WGS of Felis catus and Panthera tigris. Three individual specimens for each species were amplified and shown by gel electrophoresis analysis. University of Chicago Press; Only sequences that presented matches with high statistical significance i. DS3 focused on the Gamma -like elements described in detail below , while DS4 focused on the class II ERVs incorporating GenBank sequences retrieved with Blast searches, as well as elements previously reported in the literature. MAFFT multiple sequence alignment software version 7:

ERVs termed Gamma by Song et al. The evolution, distribution and diversity of endogenous retroviruses. The scale bar at the bottom represents the evolutionary distance in amino acid substitutions per site. Pol similarities indicate that they comprised at least eleven lineages of gammaretroviruses including class I ERVs , three of betaretroviruses including class II ERVs and one divergent group whose position in our phylogeny was difficult to establish confidently relative to known retroviruses. MY, million years; ND, not dated. Cold Spring Harbour Laboratory; Interestingly, these clades also harboured sequences from diverse host species, representing several mammalian groups.

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